28. View protein in PROSITE; PS00027 HOMEOBOX_1 1 hit; PS50071 HOMEOBOX_2 1 hit; Pfam. Several observations suggest that Zip3 … Sep 1, 2007 · The HD-Zip family of transcription factors is unique to the plant kingdom.Some ZIPs are regulated by dietary zinc, while others are responsive to hormonal signaling (Table 1). GLABRA 2-like homeobox protein 5; HD-ZIP protein ROC5; Homeodomain transcription factor ROC5; Protein RICE OUTERMOST CELL-SPECIFIC 5; Gene names. bZIPs and A-ZIPs expressing plasmids were transformed into E. Their genes are expressed in various tissues and cell types, and their proteins are localized to distinct subcellular compartments (Table 1, Fig. zip1 strains undergo homologous … 2022 · Zinc/iron-regulated transporter-like protein (ZIP) family genes play crucial roles in metal uptake and transport in plants. ZIP proteins are believed to have eight transmembrane domains (TM, labeled 1-8) and N- and C-termini that are extracellular or within the lumen of intracellular organelles. The ATHB17 monomer contains four domains common to all class II HD-Zip proteins: a putative repression domain adjacent to a homeodomain, leucine zipper, and … 2021 · These transporters are involved in the uptake, transport and compartmentation of metal ions in plants, and maintain the balance of elements in plants. coli BL21 (DE-3) strain following standard protocols . 2022 · This incorporates the two properties (zinc sensing and transport) held by the ZIP transporters into two neuronal proteins (PrP C as zinc sensor, AMPA receptor as zinc transporter) potentially increasing their biological efficiency and functionality.
2015; Kovalchuk et al. Protein sequences of HD-Zip genes were aligned using MUSCLE [37]. 2022 · The zinc/iron-regulated transporter-like protein (ZIP) family has a crucial role in Zn homeostasis of plants. Many members of the HD-Zip protein family have been found in a wide variety of plant species, and many efforts have been undertaken to elucidate the functions of HD-Zip genes. The Arabidopsis thaliana REVOLUTA (REV) protein is a member of the class III homeodomain-leucine zipper (HD-ZIPIII) proteins. Homeodomain-leucine zipper protein HAT3 (HD-ZIP protein 3) Gene names.
For example, AtHB1 ( Arabidopsis thaliana HomeoBox 1), which is a member of the HD-Zip I subfamily, acts downstream of PHYTOCHROME … 2022 · The evolutionary relationship of HD-ZIP genes in maize, Arabidopsis and rice was analyzed by phylogenetic analysis.. · P2 and the zip protein (P11) play crucial roles in the whole process. Alternative names. In parallel, the STeroidogenic Acute Regulatory protein-related lipid Transfer/START-Associated Domain (START/SAD) motifs were incorporated into the C … 2022 · Zip family proteins are involved in the control of zinc (Zn) ion homeostasis. 2014 · Steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains were first identified from mammalian proteins that bind lipid/sterol ligands via a hydrophobic pocket.
Origin 계정 These proteins exhibit the singular combination of a homeodomain with a leucine zipper acting as a dimerization motif. — Researchers have identified two proteins linked to blood clotting as potential markers of “brain fog,” a consistent cognitive issues that … 2018 · 30558150 PMC6320839 10. Name. The structure of this kind of proteins is characterized by a HD followed by an adjacent leucine zipper motif. (a) Crystal structure of bacterial ZnT homolog showing zinc (red spheres) bound in the intracellular domain, the membrane interface and . 2014 · Background Homeodomain-leucine zipper (HD-Zip) proteins, a group of homeobox transcription factors, participate in various aspects of normal plant growth and developmental processes as well as environmental responses.
1999 · Proteins of the closely related homeodomain-leucine zipper (HD-Zip) families I and II in plants are putative transcription factors that interact with similar pseudopalindromic DNA recognition sites. Selectivity of ZIP transporters has been the focus of earlier studies which provided a … Zinc transporters, the Zrt-, Irt-like protein (ZIP) family and the Zn transporter (ZnT) family transporters, are found in all aspects of life. Jinnan) callus treated with thidiazuron (TDZ) which reduced the embryogenic competence of the callus, … B-ZIP transcription factors dimerization is mediated by a parallel coiled-coil termed the leucine zipper. ORF names. View protein in Pfam; PF00046 Homeodomain 1 hit; PF08670 MEKHLA 1 hit; PF01852 … 2017 · Structural basis for zinc transport by ZnT and ZIP proteins., 2004). Identification of the Spermatogenic Zip Protein Spz1 as a Putative Protein ZIP8 (SLC39A8) belongs to the ZIP family of metal-ion transporters. 10, 50 Its excitation and emission peaks at 514 nm and 527 nm, respectively, are associated with stacking of Tyr66 with Tyr203.Phylogenetic analysis classified ZmHDZ proteins into four groups, each of which contains Arabidopsis … 2020 · The phylogenetic analysis of 113 plant ZIP proteins from 14 plant species revealed that the ZIP family members are mainly clustered together as per their numbers. Most AhZIPs experienced whole-genome or segmental duplication. 2020 · No three-dimensional structures of full-length human ZnT or ZIP proteins have been solved. .
ZIP8 (SLC39A8) belongs to the ZIP family of metal-ion transporters. 10, 50 Its excitation and emission peaks at 514 nm and 527 nm, respectively, are associated with stacking of Tyr66 with Tyr203.Phylogenetic analysis classified ZmHDZ proteins into four groups, each of which contains Arabidopsis … 2020 · The phylogenetic analysis of 113 plant ZIP proteins from 14 plant species revealed that the ZIP family members are mainly clustered together as per their numbers. Most AhZIPs experienced whole-genome or segmental duplication. 2020 · No three-dimensional structures of full-length human ZnT or ZIP proteins have been solved. .
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HD-ZIP protein N terminus Provide feedback. One part of the domain contains a region that mediates … 2005 · Homeodomain-leucine zipper (HDZip) proteins are transcriptional factors only identified in plants. In this study, we not only identified and characterized a new HD-Zip II gene, designated as MSHB1 (HM114227), from alfalfa (Medicago sativa L. This tab holds annotation information from the InterPro database. The HD-ZIP gene is divided into four subfamilies (groups I, II, III, and IV, with yellow, purple, green, and blue branches, respectively). They have been shown to be diverse transcriptional regulators, playing crucial roles in plant development, physiological processes, and biotic/abiotic … 2021 · The ZIP (Zn-regulated, iron-regulated transporter-like protein) transporter plays an important role in regulating the uptake, transport, and accumulation of microelements in plants.
ZIP transporters are widely … 2005 · Based on comparative phylogenetic analysis of sesame with Arabidopsis and maize HD-ZIP protein sequences, HD-ZIP Class I was subdivided into four subgroups α (SiHZ25, SiHZ43, SiHZ9 and SiHZ16 . View … 2017 · HD-ZIP III proteins are distinguished from HD-ZIP IV by virtue of a conserved MEKHLA domain at the carboxyl terminus. Proteins in each group recognize different DNA sequences in vitro . of MBW protein complex by other factors. Also, to better highlight the difference between Eucalyptus … · In-silico identification of SiHZ proteins. 2014 · HD-Zip proteins are classified into four subfamilies, I–IV, based on the conservation of the HD-Zip domain, gene structure, additional conserved motifs and functions .정찬우 위키백과, 우리 모두의 백과사전 - 정찬우
The highly conserved HD binds specifically to DNA and the LZ mediates homodimer or heterodimer formation. The DNA binding region comprises a … 2016 · Homeodomain-leucine zipper proteins (HD-ZIPs) form a plant-specific family of transcription factors functioning as homo- or heterodimers. Fifty-five full-length genes (ZmHDZ1–ZmHDZ55) encoding putative HD-Zip proteins were identified in the maize order to confirm the reliability of HD-Zip candidate proteins in maize, the amino acid sequences of the 55 proteins were searched for the presence of both HD domain … 2022 · 35]. EYFP is a GFP variant comprising of S65G, V68L, S72A, and T203Y substitutions relative to wild-type GFP. These genes have not been fully studied in allopolyploid Brassica napus, an important kind of oil crop. P6981 inhibited the growth of a patient-derived clear cell sarcoma cell line whose oncogenic potential is driven by a chimeric protein EWS-ATF1 (Ewing's sarcoma protein-activating transcription factor 1), which … 2000 · The ZIP proteins we have identified to date are predicted to range in size from 36 to 39 kDa, suggesting that the wheat protein may be a member of the ZIP family.
The N-terminal region, which contains several conserved features including multiple predicted N -linked glycosylation sites, has been proposed to modulate metal transport activity ( 54 ). In this study, 165 HD-Zip genes were identified in B. Here, genome . … Sep 28, 2022 · The ZIP protein ( ZRT , the IRT -like protein) is an important metal transporter that transports Zn, Fe, and other divalent metal ions in plants. 2016). Here, we identified a total of 31 … 2018 · HD-Zip proteins are unique to plants, and contain a homeodomain closely linked to a leucine zipper motif, which are involved in dimerization and DNA binding.
Amino acid alignment of B-ZIP proteins allowed the identification of the B-ZIP motif, a long bipartite α-helix that is 60 to 80 amino acids long (). Data are expressed as the mean ± S. Arabidopsis thaliana (Mouse-ear cress) Taxonomic identifier. So far, our knowledge of the functions of HD-Zips in woodland strawberries (Fragaria vesca), a model plant for studying ABA-mediated fruit ripening, is limited. … 2023 · Overall structure of a transmembrane ZIP zinc transporter protein determined by cryo-electron microscopy (cryo-EM) (left) and a schematic showing some of the functional features (right). In this study, a genome-wide analysis of ZIP family gene in wild emmer was … 2018 · The majority of HD-ZIP I proteins are involved in the regulation of cotyledon development, leaf cell fate determination, and blue light signaling 17,18. They were first described by Landschulz and collaborators in 1988 [2 ., … 2020 · Phylogenetic and evolutionary analysis of HD-Zip proteins in Eucalyptus. In the same MC-2, SbZIP2 is closely and distantly associated with SiZIP3 and OsZIP2, respectively. In this study, we identified 20 ZIP genes in . Here we report the first crystal structure of a … Sep 13, 2004 · PTHR45950 HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 hit; PTHR45950:SF7 HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 hit; PROSITE. 2014 · In plants, light levels are sensed by phytochromes, and prolonged light deprivation triggers leaf senescence. 70a 크기 T8B10_50. Expressed similarly in L1-layer or protoderm in young and developed floral shoots. They can be classified into four subfamilies, according to a set of distinctive features that include DNA-binding specificities, gene structures, additional … 2012 · We have identified transcription factors that interact with a promoter region involved in expression of the Arabidopsis thaliana COX5b-1 gene, which encodes an isoform of the cytochrome c oxidase zinc binding subunit. SREBP-1 contains a basic-helix-loop-helix-leucine zipper (bHLH-ZIP) motif, but it differs from other bHLH-ZIP proteins in its larger size (1147 amino acids) and target sequence. 2014 · Expression patterns of Zip proteins. The ZIP family consists of zinc transport proteins and many putative metal transporters. Zinc Transporter Proteins: A Review and a New View from
T8B10_50. Expressed similarly in L1-layer or protoderm in young and developed floral shoots. They can be classified into four subfamilies, according to a set of distinctive features that include DNA-binding specificities, gene structures, additional … 2012 · We have identified transcription factors that interact with a promoter region involved in expression of the Arabidopsis thaliana COX5b-1 gene, which encodes an isoform of the cytochrome c oxidase zinc binding subunit. SREBP-1 contains a basic-helix-loop-helix-leucine zipper (bHLH-ZIP) motif, but it differs from other bHLH-ZIP proteins in its larger size (1147 amino acids) and target sequence. 2014 · Expression patterns of Zip proteins. The ZIP family consists of zinc transport proteins and many putative metal transporters.
큐알 론 Conclusions Two ZIP-family zinc transporter orthologs of human ZIP6/10 and ZIP1/2/3 proteins are important for full reproductive fecundity and participate in development of the gonad. The subcellular localizations of ZNT and ZIP protein members are shown according to their subfamily and subgroup assignments described in the main text and Fig. Loss of function of HAT1 in the Arabidopsis seedlings exhibits increased anthocyanin accumulation, whereas overexpression of HAT1 signifi- · Leucine zipper. Phenotypic analyses show that overexpression of … Sep 1, 2020 · 1. More and more evidence shows that the HD-ZIP gene is associated with plant growth and development . Based on the amino acid sequence similarity and intron positions in the corresponding genomic sequences, HDZip proteins can be … 1999 · The ATHB-2 gene encoding an homeodomain-leucine zipper protein is rapidly and strongly induced by changes in the ratio of red to far-red light which naturally occur during the daytime under the canopy and induce in many plants the shade avoidance response.
The N-terminal half contains two clusters of basic amino acids responsible for sequence-specific DNA binding, while the C-terminal half contains an amphipathic protein sequence of variable … 2023 · The Basic Leucine Zipper Domain (bZIP domain) is found in many DNA binding eukaryotic proteins. Monocot and dicot plant ZIPs are … 2022 · Homeodomain-leucine zipper (HD-Zip) genes encode plant-specific transcription factors, which play important roles in plant growth, development, and response to environmental stress. Such studies are also those described in this work. Background: ZIP13 protein is important for connective tissue development, which has not been characterized in s: ZIP13 is an eight-transmembrane protein with a unique hydrophilic region that forms a homo-sion: ZIP13 is a homo-dimerized zinc transporter that possesses domains that are not found in other LZT … 1993 · ZIP1 is a novel meiosis-specific gene required for chromosome synapsis and cell cycle progression in S. Accumulated Zn 2+ in platelets with a TMEM163 deficiency (or BLOC-1, BLOC-2, or AP-3 deficiency) may disrupt the ion homeostasis that is essential for DG biogenesis and secretion. dicoccoides) is not yet well understood.
Ubiquitin is a 76-amino acid peptide that is covalently attached to proteins targeting them to the proteasome complex for degradation [13]. To do this, we designed … Phylogenetic and sequence analysis Besides HD-Zips from Arabidopsis and rice, protein sequences of published HD-Zip genes from Vitis vinifera, Medicago truncatula, Populus trichocarpa, and maize [5,36] were also used. The purpose of this study was to analyze the characteristics of the HD-ZIP genes/proteins and to study their expression profiles under high and low temperature conditions in potato (Solanum tuberosum L. They support auxin biosynthesis, . HAT3. 15 hours ago · NEW: Get breaking news delivered straight to your desktop or mobile phone. ZIP9, a novel membrane androgen receptor and zinc transporter protein
The current knowledge on zinc transporter structure and … This domain is identical in ZIP3, and accordingly, ZIP3 was able to dimerize with all ZIP proteins and to bind to PKC-ζ. · B-ZIP dimerization in vivo. 2023 · The zinc/iron-regulated transporter-like protein (ZIP) gene family first identified in plants is highly distributed in the plant kingdom. In this study, we identified … 16 hours ago · STATEN ISLAND, N. Motifs 4 and 9 only existed in HD-Zip II, and motif 6 was unique to HD-Zip I. 2018 · Zinc is an important trace metal in immune systems, and zinc transporters are involved in many immune responses.Photoshop 2022 크랙
We give an insight … 2016 · The critical role of the ECD is manifested by disease-causing mutations on ZIP4, a representative LIV-1 protein. In this work, we investigated the evolution of functional homologs of IRON-REGULATED TRANSPORTER 1/ZIP in the supergroup Archaeplastida (Viridiplantae + Rhodophyta + Glaucophyta) using 51 genomes of diverse lineages.3390/ijms19124047 genes using transcriptomic and genomic datasets from a wide range of plant species indicate that the HD-Zip … Sep 5, 2022 · The ZIP (Zrt and Irt-like proteins) protein family includes transporters responsible for the translocation of zinc and other transition metals, such as iron and … 2023 · The most desirable ZIP code for U. 2020 · Jian Hu First published: 09 December 2020 Citations: 24 Sections PDF Tools Share Abstract The Zrt-/Irt-like protein (ZIP) family … Sep 10, 2020 · Larix olgensis is one of the main coniferous tree species in northeastern China and has excellent timber properties and strong tolerance to stress.The characteristic feature of HD-ZIP proteins is the combination of a HD DNA-binding domain with an adjacent leucine-zipper (LZ) domain associated with protein dimerization [1]. It is … 2002 · Amino acid sequence of all 53 human B-ZIP domains.
Although some . Based on homology in the HD-Zip domain, gene structure and the presence of additional motifs, HD-Zips are divided into four families, HD-Zip I … 2017 · The cellular prion protein, notorious for its causative role in a range of fatal neurodegenerative diseases, evolved from a Zrt-/Irt-like Protein (ZIP) zinc transporter approximately 500 million . ORF names. 3702 NCBI. Analysis of the … 2011 · The phylogeny and structures of the HD-Zip I–IV genes and proteins have recently been investigated by Henriksson et al. View protein in Pfam; PF02183 HALZ 1 hit; PF00046 Homeodomain 1 hit; SMART.
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